Function reference

All functions

sHDL()

Perform heritability enrichment analysis of trait based on GWAS summary statistics.

sHDL.joint()

Maximize the log likelihood to infer the heritability enrichment folds jointly.

sHDL.optim()

Maximize the log likelihood to infer the heritability enrichment fold(s).

sHDL.rebuild.ref()

Re-build the LD reference panel with given SNPs.

sHDL.reduct.dim()

Reduce the dimension of covariance matrix by converting z (D) to zr (Dr).